Align two or more sequences using blastn

blastn

  • Nucleotide-Nucleotide BLAST.
    More information: <https://www.ncbi.nlm.nih.gov/books/NBK279684/table/appendices.T.blastn_application_options/>.
  • Trick copyright: tl;dr; <https://github.com/tldr-pages/tldr>

blastn -task blastn -query {{query.fa}} -subject {{subject.fa}}

click the source code to copy install blastn on any operating system with command-not-found.com